Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.22■□□□□ 0.03
VTNP04004 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 MIR8071-1-201ENST00000616769 65 ntBASIC15.22■□□□□ 0.03
VTNP04004 MIR8071-2-201ENST00000616772 65 ntBASIC15.22■□□□□ 0.03
VTNP04004 FO393412.1-201ENST00000619841 382 ntBASIC15.22■□□□□ 0.03
VTNP04004 MIR6746-201ENST00000620971 63 ntBASIC15.22■□□□□ 0.03
VTNP04004 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC15.22■□□□□ 0.03
VTNP04004 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.22■□□□□ 0.03
VTNP04004 AC040160.2-201ENST00000623816 1675 ntBASIC15.22■□□□□ 0.03
VTNP04004 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
VTNP04004 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
VTNP04004 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
VTNP04004 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.21■□□□□ 0.03
VTNP04004 AC026748.1-201ENST00000624349 3251 ntBASIC15.21■□□□□ 0.03
VTNP04004 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
VTNP04004 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC15.21■□□□□ 0.03
VTNP04004 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC15.21■□□□□ 0.03
VTNP04004 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VTNP04004 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.21■□□□□ 0.03
VTNP04004 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
VTNP04004 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC15.21■□□□□ 0.03
VTNP04004 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.21■□□□□ 0.03
VTNP04004 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
VTNP04004 AC106827.1-201ENST00000366454 431 ntBASIC15.21■□□□□ 0.03
VTNP04004 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.21■□□□□ 0.03
VTNP04004 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC15.21■□□□□ 0.03
VTNP04004 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC15.21■□□□□ 0.03
VTNP04004 AK2P2-201ENST00000439142 405 ntBASIC15.21■□□□□ 0.03
VTNP04004 AL135901.1-201ENST00000451812 333 ntBASIC15.21■□□□□ 0.03
VTNP04004 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.21■□□□□ 0.03
VTNP04004 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
VTNP04004 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.21■□□□□ 0.03
VTNP04004 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.21■□□□□ 0.03
VTNP04004 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
VTNP04004 AL136982.5-201ENST00000605222 294 ntBASIC15.21■□□□□ 0.03
VTNP04004 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
VTNP04004 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.21■□□□□ 0.03
VTNP04004 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VTNP04004 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VTNP04004 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.21■□□□□ 0.02
VTNP04004 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VTNP04004 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.21■□□□□ 0.02
VTNP04004 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VTNP04004 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VTNP04004 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VTNP04004 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.2■□□□□ 0.02
VTNP04004 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.2■□□□□ 0.02
VTNP04004 FAM21EP-201ENST00000417804 985 ntBASIC15.2■□□□□ 0.02
VTNP04004 PSAT1P2-201ENST00000426107 972 ntBASIC15.2■□□□□ 0.02
VTNP04004 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.2■□□□□ 0.02
VTNP04004 AC007279.1-201ENST00000448547 837 ntBASIC15.2■□□□□ 0.02
VTNP04004 RN7SL351P-201ENST00000469306 248 ntBASIC15.2■□□□□ 0.02
VTNP04004 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms