Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 PPT1-213ENST00000641319 2388 ntBASIC12.88□□□□□ -0.35
NKX2-2O95096 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NKX2-2O95096 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
NKX2-2O95096 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX2-2O95096 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX2-2O95096 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.88□□□□□ -0.35
NKX2-2O95096 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX2-2O95096 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 RCC2P5-201ENST00000492126 1487 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 TCAF1P1-201ENST00000414990 2232 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
NKX2-2O95096 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 RPL8P2-201ENST00000430538 502 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 EEF1DP2-201ENST00000433698 843 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX2-2O95096 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX2-2O95096 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
NKX2-2O95096 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.87□□□□□ -0.35
NKX2-2O95096 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
NKX2-2O95096 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.87□□□□□ -0.35
NKX2-2O95096 AL049840.2-201ENST00000602722 535 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 AC012044.1-201ENST00000603431 297 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 AL031673.1-201ENST00000611460 466 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 AC006453.1-201ENST00000636037 1257 ntBASIC12.87□□□□□ -0.35
NKX2-2O95096 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NKX2-2O95096 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX2-2O95096 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NKX2-2O95096 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
NKX2-2O95096 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX2-2O95096 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX2-2O95096 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX2-2O95096 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.86□□□□□ -0.35
NKX2-2O95096 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 AC106827.1-201ENST00000366454 431 ntBASIC12.86□□□□□ -0.35
NKX2-2O95096 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.86□□□□□ -0.35
NKX2-2O95096 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX2-2O95096 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.86□□□□□ -0.35
NKX2-2O95096 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.86□□□□□ -0.35
NKX2-2O95096 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
NKX2-2O95096 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
NKX2-2O95096 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX2-2O95096 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms