Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SMAD6O43541 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SMAD6O43541 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SMAD6O43541 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMAD6O43541 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 Z98885.3-201ENST00000624882 1757 ntBASIC14.05□□□□□ -0.16
SMAD6O43541 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SMAD6O43541 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 GGTLC4P-201ENST00000402176 664 ntBASIC14.05□□□□□ -0.16
SMAD6O43541 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 AC253536.4-201ENST00000440539 267 ntBASIC14.05□□□□□ -0.16
SMAD6O43541 AC007279.1-201ENST00000448547 837 ntBASIC14.05□□□□□ -0.16
SMAD6O43541 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 AC093300.1-201ENST00000510368 1201 ntBASIC14.05□□□□□ -0.16
SMAD6O43541 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.05□□□□□ -0.16
SMAD6O43541 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SMAD6O43541 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.05□□□□□ -0.16
SMAD6O43541 FAM90A12P-201ENST00000519497 2375 ntBASIC14.05□□□□□ -0.16
SMAD6O43541 FAM90A24P-201ENST00000520792 2369 ntBASIC14.05□□□□□ -0.16
SMAD6O43541 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SMAD6O43541 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.05□□□□□ -0.16
SMAD6O43541 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
SMAD6O43541 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SMAD6O43541 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 LINC00638-201ENST00000555578 2518 ntBASIC14.04□□□□□ -0.16
SMAD6O43541 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.04□□□□□ -0.16
SMAD6O43541 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
SMAD6O43541 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.04□□□□□ -0.16
SMAD6O43541 AC073210.1-201ENST00000414799 232 ntBASIC14.04□□□□□ -0.16
SMAD6O43541 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SMAD6O43541 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.04□□□□□ -0.16
SMAD6O43541 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.04□□□□□ -0.16
SMAD6O43541 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.04□□□□□ -0.16
SMAD6O43541 AC006529.1-201ENST00000459978 637 ntBASIC14.04□□□□□ -0.16
SMAD6O43541 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.04□□□□□ -0.16
SMAD6O43541 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC14.04□□□□□ -0.16
SMAD6O43541 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms