Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
COPS3Q9UNS2 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 VENTXP1-201ENST00000569334 2716 ntBASIC12.56□□□□□ -0.4
COPS3Q9UNS2 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 PGAM1P5-201ENST00000548011 764 ntBASIC12.56□□□□□ -0.4
COPS3Q9UNS2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 AL355385.1-201ENST00000606123 409 ntBASIC12.56□□□□□ -0.4
COPS3Q9UNS2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 MSNP1-201ENST00000511640 1732 ntBASIC12.56□□□□□ -0.4
COPS3Q9UNS2 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
COPS3Q9UNS2 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 AC115284.2-201ENST00000624646 2054 ntBASIC12.55□□□□□ -0.4
COPS3Q9UNS2 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 PCDHB17P-202ENST00000623466 3066 ntBASIC12.55□□□□□ -0.4
COPS3Q9UNS2 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 KRT18P36-201ENST00000411618 1276 ntBASIC12.55□□□□□ -0.4
COPS3Q9UNS2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 AC092580.1-201ENST00000433998 658 ntBASIC12.55□□□□□ -0.4
COPS3Q9UNS2 OR2R1P-201ENST00000441404 914 ntBASIC12.55□□□□□ -0.4
COPS3Q9UNS2 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
COPS3Q9UNS2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms