Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 CSPG4P11-201ENST00000560634 4910 ntBASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 LINC01165-201ENST00000445190 1623 ntBASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 AL355102.3-201ENST00000554299 1678 ntBASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 PTPRVP-205ENST00000641549 5067 ntBASIC13.01□□□□□ -0.33
POLR2J2Q9GZM3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 REXO1L1P-201ENST00000379010 6598 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 AC018629.1-201ENST00000623381 1736 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 POM121L14P-201ENST00000406100 1558 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 AL139158.3-201ENST00000641212 1562 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 CTBP2P5-201ENST00000454986 1264 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 AC005324.6-201ENST00000587972 613 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 AL162274.1-201ENST00000617191 1098 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 AL023803.2-201ENST00000620080 638 ntBASIC13□□□□□ -0.33
POLR2J2Q9GZM3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
POLR2J2Q9GZM3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms