Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RNF44Q7L0R7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.45□□□□□ -0.26
RNF44Q7L0R7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.45□□□□□ -0.26
RNF44Q7L0R7 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AC138894.2-201ENST00000602838 371 ntBASIC13.45□□□□□ -0.26
RNF44Q7L0R7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AL353726.2-201ENST00000623259 884 ntBASIC13.45□□□□□ -0.26
RNF44Q7L0R7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AC128714.1-201ENST00000637035 887 ntBASIC13.45□□□□□ -0.26
RNF44Q7L0R7 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 LINC02486-201ENST00000604157 3000 ntBASIC13.45□□□□□ -0.26
RNF44Q7L0R7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RNF44Q7L0R7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AC011474.4-201ENST00000623523 2076 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AL928921.2-201ENST00000641325 2442 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AC006372.4-201ENST00000624122 1543 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AL731571.1-201ENST00000617058 5428 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AL627422.1-201ENST00000434104 580 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 FGFR3P1-201ENST00000449999 601 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 RN7SL788P-201ENST00000460504 316 ntBASIC13.44□□□□□ -0.26
RNF44Q7L0R7 AC095040.1-201ENST00000513286 675 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms