Protein–RNA interactions for Protein: P55769

SNU13, NHP2-like protein 1, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13P55769 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
SNU13P55769 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.17□□□□□ -0.46
SNU13P55769 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.17□□□□□ -0.46
SNU13P55769 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SNU13P55769 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.17□□□□□ -0.46
SNU13P55769 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNU13P55769 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.17□□□□□ -0.46
SNU13P55769 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 LAP3P2-201ENST00000454686 1454 ntBASIC12.16□□□□□ -0.46
SNU13P55769 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.16□□□□□ -0.46
SNU13P55769 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.16□□□□□ -0.46
SNU13P55769 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.16□□□□□ -0.46
SNU13P55769 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.16□□□□□ -0.46
SNU13P55769 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.16□□□□□ -0.46
SNU13P55769 AC079178.1-201ENST00000420915 656 ntBASIC12.16□□□□□ -0.46
SNU13P55769 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.16□□□□□ -0.46
SNU13P55769 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SNU13P55769 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 CR383656.12-201ENST00000549567 513 ntBASIC12.16□□□□□ -0.46
SNU13P55769 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.16□□□□□ -0.46
SNU13P55769 MIR4783-201ENST00000580343 82 ntBASIC12.16□□□□□ -0.46
SNU13P55769 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.16□□□□□ -0.46
SNU13P55769 AC009955.4-201ENST00000597192 544 ntBASIC12.16□□□□□ -0.46
SNU13P55769 AL162274.1-201ENST00000617191 1098 ntBASIC12.16□□□□□ -0.46
SNU13P55769 AC009542.2-202ENST00000619004 1067 ntBASIC12.16□□□□□ -0.46
SNU13P55769 AC008687.7-202ENST00000637404 953 ntBASIC12.16□□□□□ -0.46
SNU13P55769 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SNU13P55769 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.16□□□□□ -0.46
SNU13P55769 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 LINC00567-201ENST00000569854 3409 ntBASIC12.16□□□□□ -0.46
SNU13P55769 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SNU13P55769 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.16□□□□□ -0.46
SNU13P55769 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SNU13P55769 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SNU13P55769 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.15□□□□□ -0.46
SNU13P55769 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 AP002761.4-201ENST00000565433 3361 ntBASIC12.15□□□□□ -0.46
SNU13P55769 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.15□□□□□ -0.46
SNU13P55769 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.15□□□□□ -0.46
SNU13P55769 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
SNU13P55769 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.15□□□□□ -0.46
SNU13P55769 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SNU13P55769 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.15□□□□□ -0.46
SNU13P55769 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SNU13P55769 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SNU13P55769 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms