Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC10.28□□□□□ -0.76
APOC4P55056 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC10.28□□□□□ -0.76
APOC4P55056 AC007250.1-201ENST00000608934 338 ntBASIC10.28□□□□□ -0.76
APOC4P55056 AC084781.1-201ENST00000613737 656 ntBASIC10.28□□□□□ -0.76
APOC4P55056 YRDCP1-201ENST00000621419 643 ntBASIC10.28□□□□□ -0.76
APOC4P55056 AC073911.3-201ENST00000624401 631 ntBASIC10.28□□□□□ -0.76
APOC4P55056 AC005618.3-201ENST00000624928 458 ntBASIC10.28□□□□□ -0.76
APOC4P55056 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 KRT8P43-201ENST00000406052 1458 ntBASIC10.28□□□□□ -0.76
APOC4P55056 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
APOC4P55056 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
APOC4P55056 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.28□□□□□ -0.76
APOC4P55056 AC097359.2-201ENST00000604992 2389 ntBASIC10.28□□□□□ -0.76
APOC4P55056 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
APOC4P55056 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
APOC4P55056 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
APOC4P55056 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.76
APOC4P55056 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOC4P55056 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
APOC4P55056 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOC4P55056 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOC4P55056 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC10.27□□□□□ -0.76
APOC4P55056 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
APOC4P55056 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
APOC4P55056 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOC4P55056 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
APOC4P55056 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOC4P55056 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
APOC4P55056 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.27□□□□□ -0.77
APOC4P55056 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC10.27□□□□□ -0.77
APOC4P55056 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 AC068760.1-201ENST00000493579 1953 ntBASIC10.27□□□□□ -0.77
APOC4P55056 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 ODCP-201ENST00000459650 1639 ntBASIC10.27□□□□□ -0.77
APOC4P55056 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC10.27□□□□□ -0.77
APOC4P55056 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC10.27□□□□□ -0.77
APOC4P55056 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 MIR1307-201ENST00000408840 149 ntBASIC10.27□□□□□ -0.77
APOC4P55056 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC10.27□□□□□ -0.77
APOC4P55056 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC10.27□□□□□ -0.77
APOC4P55056 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC10.27□□□□□ -0.77
APOC4P55056 AC253536.4-201ENST00000440539 267 ntBASIC10.27□□□□□ -0.77
APOC4P55056 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC10.27□□□□□ -0.77
APOC4P55056 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 RN7SL564P-201ENST00000496309 250 ntBASIC10.27□□□□□ -0.77
APOC4P55056 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.27□□□□□ -0.77
APOC4P55056 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC10.27□□□□□ -0.77
APOC4P55056 AP000911.2-201ENST00000534330 502 ntBASIC10.27□□□□□ -0.77
APOC4P55056 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC10.27□□□□□ -0.77
APOC4P55056 MIR4649-201ENST00000582839 64 ntBASIC10.27□□□□□ -0.77
APOC4P55056 RPL17P45-201ENST00000586289 509 ntBASIC10.27□□□□□ -0.77
APOC4P55056 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
APOC4P55056 HPX-213ENST00000615166 826 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 AP001065.2-201ENST00000617205 644 ntBASIC10.27□□□□□ -0.77
APOC4P55056 AC025262.2-201ENST00000623975 1056 ntBASIC10.27□□□□□ -0.77
APOC4P55056 LINC00244-201ENST00000625073 613 ntBASIC10.27□□□□□ -0.77
APOC4P55056 SNX1-214ENST00000625244 324 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.27□□□□□ -0.77
APOC4P55056 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
APOC4P55056 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
APOC4P55056 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.27□□□□□ -0.77
APOC4P55056 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms