Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FMO6P-201ENST00000236166 1620 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CPT1AP50416 AC089987.1-201ENST00000551654 2209 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.32■□□□□ 0.04
CPT1AP50416 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 AL357373.1-201ENST00000394974 322 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CPT1AP50416 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC15.32■□□□□ 0.04
CPT1AP50416 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 IFNWP2-201ENST00000431203 580 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 AC112250.1-201ENST00000504640 745 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC15.32■□□□□ 0.04
CPT1AP50416 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.32■□□□□ 0.04
CPT1AP50416 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.32■□□□□ 0.04
CPT1AP50416 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 AC137723.2-201ENST00000623540 398 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.32■□□□□ 0.04
CPT1AP50416 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 AC020931.1-201ENST00000589622 1346 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 KRT8P42-201ENST00000405771 1399 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CPT1AP50416 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CPT1AP50416 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.31■□□□□ 0.04
CPT1AP50416 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPT1AP50416 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 AK2P2-201ENST00000439142 405 ntBASIC15.31■□□□□ 0.04
CPT1AP50416 AC133141.1-201ENST00000443015 339 ntBASIC15.31■□□□□ 0.04
CPT1AP50416 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 BCRP4-201ENST00000506079 804 ntBASIC15.31■□□□□ 0.04
CPT1AP50416 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.31■□□□□ 0.04
CPT1AP50416 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.31■□□□□ 0.04
CPT1AP50416 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.31■□□□□ 0.04
CPT1AP50416 RN7SL121P-201ENST00000584223 273 ntBASIC15.31■□□□□ 0.04
CPT1AP50416 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.31■□□□□ 0.04
CPT1AP50416 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.31■□□□□ 0.04
CPT1AP50416 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CPT1AP50416 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.31■□□□□ 0.04
CPT1AP50416 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.31■□□□□ 0.04
CPT1AP50416 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPT1AP50416 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.31■□□□□ 0.04
CPT1AP50416 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CPT1AP50416 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPT1AP50416 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.3■□□□□ 0.04
CPT1AP50416 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPT1AP50416 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms