Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDE6BP35913 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6BP35913 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 NORAD-201ENST00000565493 5339 ntBASIC17■□□□□ 0.31
PDE6BP35913 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC17■□□□□ 0.31
PDE6BP35913 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 PTN-202ENST00000393083 1599 ntTSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC17■□□□□ 0.31
PDE6BP35913 RN7SL838P-201ENST00000481676 295 ntBASIC17■□□□□ 0.31
PDE6BP35913 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC17■□□□□ 0.31
PDE6BP35913 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 FES-203ENST00000394302 2133 ntTSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17■□□□□ 0.31
PDE6BP35913 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDE6BP35913 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC17■□□□□ 0.31
PDE6BP35913 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.99■□□□□ 0.31
PDE6BP35913 AC099063.4-201ENST00000641099 1602 ntBASIC16.99■□□□□ 0.31
PDE6BP35913 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PDE6BP35913 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PDE6BP35913 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PDE6BP35913 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.99■□□□□ 0.31
PDE6BP35913 AC133555.4-201ENST00000569081 152 ntBASIC16.99■□□□□ 0.31
PDE6BP35913 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.99■□□□□ 0.31
PDE6BP35913 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
PDE6BP35913 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 CICP4-201ENST00000447359 2812 ntBASIC16.99■□□□□ 0.31
PDE6BP35913 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PDE6BP35913 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.99■□□□□ 0.31
PDE6BP35913 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.99■□□□□ 0.31
PDE6BP35913 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6BP35913 AL365209.1-201ENST00000624418 6473 ntBASIC16.99■□□□□ 0.31
PDE6BP35913 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PDE6BP35913 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6BP35913 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6BP35913 AC093462.1-201ENST00000621167 1683 ntBASIC16.98■□□□□ 0.31
PDE6BP35913 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6BP35913 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDE6BP35913 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6BP35913 HNRNPA1P25-201ENST00000422644 937 ntBASIC16.98■□□□□ 0.31
PDE6BP35913 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC16.98■□□□□ 0.31
PDE6BP35913 AC092865.2-201ENST00000439409 971 ntBASIC16.98■□□□□ 0.31
PDE6BP35913 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 RN7SL672P-201ENST00000474091 317 ntBASIC16.98■□□□□ 0.31
PDE6BP35913 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6BP35913 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms