Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LINC00638-201ENST00000555578 2518 ntBASIC14.41□□□□□ -0.1
ERCC2P18074 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.41□□□□□ -0.1
ERCC2P18074 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ERCC2P18074 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.41□□□□□ -0.1
ERCC2P18074 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ERCC2P18074 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ERCC2P18074 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.41□□□□□ -0.1
ERCC2P18074 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ERCC2P18074 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
ERCC2P18074 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.41□□□□□ -0.1
ERCC2P18074 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ERCC2P18074 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ERCC2P18074 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
ERCC2P18074 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.4□□□□□ -0.1
ERCC2P18074 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.4□□□□□ -0.1
ERCC2P18074 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.4□□□□□ -0.1
ERCC2P18074 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 RPL18AP8-201ENST00000486071 528 ntBASIC14.4□□□□□ -0.1
ERCC2P18074 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.4□□□□□ -0.1
ERCC2P18074 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.4□□□□□ -0.1
ERCC2P18074 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.4□□□□□ -0.1
ERCC2P18074 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ERCC2P18074 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
ERCC2P18074 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.4□□□□□ -0.1
ERCC2P18074 AC009560.1-201ENST00000620208 434 ntBASIC14.4□□□□□ -0.1
ERCC2P18074 AC091812.3-201ENST00000621362 345 ntBASIC14.4□□□□□ -0.1
ERCC2P18074 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ERCC2P18074 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.4□□□□□ -0.1
ERCC2P18074 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.4□□□□□ -0.1
ERCC2P18074 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.4□□□□□ -0.1
ERCC2P18074 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.4□□□□□ -0.1
ERCC2P18074 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ERCC2P18074 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
ERCC2P18074 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ERCC2P18074 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
ERCC2P18074 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ERCC2P18074 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.39□□□□□ -0.11
ERCC2P18074 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
ERCC2P18074 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.39□□□□□ -0.11
ERCC2P18074 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ERCC2P18074 AL662890.1-201ENST00000396818 632 ntBASIC14.39□□□□□ -0.11
ERCC2P18074 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.39□□□□□ -0.11
ERCC2P18074 AC098934.1-203ENST00000442868 1262 ntBASIC14.39□□□□□ -0.11
ERCC2P18074 IGHJ2P-201ENST00000454480 60 ntBASIC14.39□□□□□ -0.11
ERCC2P18074 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC2P18074 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 AC095040.1-201ENST00000513286 675 ntBASIC14.39□□□□□ -0.11
ERCC2P18074 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.39□□□□□ -0.11
ERCC2P18074 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC2P18074 CHMP4BP1-201ENST00000556017 588 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms