Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AL021707.6-201ENST00000609212 491 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AC091544.8-201ENST00000619490 361 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 AC100757.4-201ENST00000626934 759 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AL445209.1-201ENST00000607269 3491 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AC138028.6-201ENST00000616106 1482 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AC107918.4-201ENST00000641966 3141 ntBASIC12.57□□□□□ -0.4
HLA-DOBP13765 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 CR383656.2-201ENST00000548656 2254 ntBASIC12.57□□□□□ -0.4
HLA-DOBP13765 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 AC006987.1-201ENST00000413610 527 ntBASIC12.57□□□□□ -0.4
HLA-DOBP13765 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 NDUFV2P1-201ENST00000596415 907 ntBASIC12.57□□□□□ -0.4
HLA-DOBP13765 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 AC093462.1-201ENST00000621167 1683 ntBASIC12.57□□□□□ -0.4
HLA-DOBP13765 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.57□□□□□ -0.4
HLA-DOBP13765 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HLA-DOBP13765 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 ABCD1P2-201ENST00000429313 1601 ntBASIC12.56□□□□□ -0.4
HLA-DOBP13765 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.56□□□□□ -0.4
HLA-DOBP13765 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HLA-DOBP13765 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms