Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMP1P01033 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMP1P01033 SAA2-206ENST00000530400 323 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMP1P01033 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC14.79□□□□□ -0.04
TIMP1P01033 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMP1P01033 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMP1P01033 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMP1P01033 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMP1P01033 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC14.79□□□□□ -0.04
TIMP1P01033 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMP1P01033 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 AL031768.1-201ENST00000606542 701 ntBASIC14.79□□□□□ -0.04
TIMP1P01033 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
TIMP1P01033 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 AC132872.4-202ENST00000622924 2756 ntBASIC14.79□□□□□ -0.04
TIMP1P01033 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMP1P01033 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TIMP1P01033 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TIMP1P01033 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.79□□□□□ -0.04
TIMP1P01033 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TIMP1P01033 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 FMO6P-201ENST00000236166 1620 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 AC097474.1-201ENST00000506481 1371 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 CFL1P6-201ENST00000400899 494 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 AL356653.1-201ENST00000402743 360 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 RBMXP1-201ENST00000408004 1191 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 CA5BP1-205ENST00000435806 1064 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 RNF7-205ENST00000480908 782 ntTSL 4 BASIC14.78□□□□□ -0.04
TIMP1P01033 HNRNPA1P4-201ENST00000509706 756 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 AC103724.2-201ENST00000520355 476 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.78□□□□□ -0.04
TIMP1P01033 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TIMP1P01033 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC14.78□□□□□ -0.04
TIMP1P01033 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC14.78□□□□□ -0.04
TIMP1P01033 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.78□□□□□ -0.04
TIMP1P01033 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 AC012617.1-204ENST00000586340 2305 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TIMP1P01033 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 AL513497.1-201ENST00000624273 2083 ntBASIC14.78□□□□□ -0.04
TIMP1P01033 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TIMP1P01033 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC14.78□□□□□ -0.04
TIMP1P01033 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TIMP1P01033 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TIMP1P01033 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TIMP1P01033 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.77□□□□□ -0.04
TIMP1P01033 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.77□□□□□ -0.04
TIMP1P01033 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
TIMP1P01033 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TIMP1P01033 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.77□□□□□ -0.04
TIMP1P01033 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TIMP1P01033 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC14.77□□□□□ -0.04
TIMP1P01033 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TIMP1P01033 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms