Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 AC100858.1-201ENST00000514059 1228 ntBASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 AC011471.3-201ENST00000623576 402 ntBASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 AC097359.2-201ENST00000604992 2389 ntBASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.2■□□□□ 0.18
CTDP1Q9Y5B0 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 LINC02486-201ENST00000604157 3000 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AC068760.1-201ENST00000493579 1953 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 OR2W2P-201ENST00000406313 909 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AC008026.2-201ENST00000495438 348 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 PRSS3P1-201ENST00000503996 742 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 COQ10BP2-201ENST00000513804 724 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AC010976.2-201ENST00000609697 852 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AL136379.1-201ENST00000623471 2642 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 AC106881.1-201ENST00000605849 3329 ntBASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.19■□□□□ 0.18
CTDP1Q9Y5B0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 AC091769.1-201ENST00000619576 568 ntBASIC16.18■□□□□ 0.18
CTDP1Q9Y5B0 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms