Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RCL1Q9Y2P8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 MIR943-201ENST00000401286 94 ntBASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 BX842568.4-201ENST00000421222 227 ntBASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AP001063.1-201ENST00000568332 529 ntBASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AC133539.2-201ENST00000604757 467 ntBASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AL590824.1-201ENST00000403828 1349 ntBASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ZNF493-208ENST00000599461 1769 ntBASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RCL1Q9Y2P8 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
RCL1Q9Y2P8 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms