Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 AC092580.3-201ENST00000430932 139 ntBASIC12.55□□□□□ -0.4
SSR3Q9UNL2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 AC009407.1-201ENST00000568958 598 ntBASIC12.55□□□□□ -0.4
SSR3Q9UNL2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 AC021016.3-201ENST00000608367 477 ntBASIC12.55□□□□□ -0.4
SSR3Q9UNL2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 AC008761.3-201ENST00000624803 892 ntBASIC12.55□□□□□ -0.4
SSR3Q9UNL2 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 AC018445.4-201ENST00000624066 2291 ntBASIC12.55□□□□□ -0.4
SSR3Q9UNL2 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 DNM1P41-201ENST00000623634 3350 ntBASIC12.55□□□□□ -0.4
SSR3Q9UNL2 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SSR3Q9UNL2 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC011700.1-201ENST00000610409 2627 ntBASIC12.54□□□□□ -0.4
SSR3Q9UNL2 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 MYCLP2-201ENST00000449268 967 ntBASIC12.54□□□□□ -0.4
SSR3Q9UNL2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC093433.1-201ENST00000458048 571 ntBASIC12.54□□□□□ -0.4
SSR3Q9UNL2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 MIR3687-2-201ENST00000577708 61 ntBASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AL158211.3-201ENST00000607385 239 ntBASIC12.54□□□□□ -0.4
SSR3Q9UNL2 MIR3687-1-201ENST00000614492 61 ntBASIC12.54□□□□□ -0.4
SSR3Q9UNL2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 AL031432.4-201ENST00000641729 2190 ntBASIC12.54□□□□□ -0.4
SSR3Q9UNL2 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SSR3Q9UNL2 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms