Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 RNA5SP491-201ENST00000362936 118 ntBASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 HLA-DMA-202ENST00000395303 1007 ntBASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 URAHP-205ENST00000610227 398 ntBASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
SYNPO2Q9UMS6 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 ZNF493-208ENST00000599461 1769 ntBASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 SERF2-204ENST00000402131 586 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 CD37-203ENST00000426897 1204 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 KRT17P4-201ENST00000429445 819 ntBASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 PEBP1P2-201ENST00000603980 558 ntBASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
SYNPO2Q9UMS6 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 AC023794.5-201ENST00000564380 2157 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 COX20P1-201ENST00000366529 357 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 AL391647.1-201ENST00000395664 511 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 RPSAP12-201ENST00000435879 888 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 NRADDP-201ENST00000437305 691 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 VDAC1P11-201ENST00000458323 852 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 RN7SL162P-201ENST00000579233 292 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 AC006548.2-201ENST00000605217 529 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC15.85■□□□□ 0.13
SYNPO2Q9UMS6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms