Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KRT8P2-201ENST00000556193 944 ntBASIC12.9□□□□□ -0.34
LRFN1Q9P244 AC068867.1-201ENST00000559855 150 ntBASIC12.9□□□□□ -0.34
LRFN1Q9P244 MIR4265-201ENST00000582152 99 ntBASIC12.9□□□□□ -0.34
LRFN1Q9P244 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 AL359091.4-201ENST00000610052 409 ntBASIC12.9□□□□□ -0.34
LRFN1Q9P244 AC105137.3-201ENST00000617588 984 ntBASIC12.9□□□□□ -0.34
LRFN1Q9P244 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 LINC00244-201ENST00000625073 613 ntBASIC12.9□□□□□ -0.34
LRFN1Q9P244 MIR193BHG-211ENST00000641433 5365 ntBASIC12.9□□□□□ -0.34
LRFN1Q9P244 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.9□□□□□ -0.34
LRFN1Q9P244 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.9□□□□□ -0.34
LRFN1Q9P244 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LRFN1Q9P244 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LRFN1Q9P244 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
LRFN1Q9P244 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LRFN1Q9P244 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LRFN1Q9P244 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LRFN1Q9P244 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.9□□□□□ -0.35
LRFN1Q9P244 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 AC025271.4-201ENST00000621477 1726 ntBASIC12.89□□□□□ -0.35
LRFN1Q9P244 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 RNA5SP406-201ENST00000516106 112 ntBASIC12.89□□□□□ -0.35
LRFN1Q9P244 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 SNORD3B-1-201ENST00000577988 758 ntBASIC12.89□□□□□ -0.35
LRFN1Q9P244 AC132825.4-202ENST00000578792 434 ntBASIC12.89□□□□□ -0.35
LRFN1Q9P244 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 BX640514.1-201ENST00000583223 1918 ntBASIC12.89□□□□□ -0.35
LRFN1Q9P244 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 TBC1D27-202ENST00000424239 1573 ntBASIC12.89□□□□□ -0.35
LRFN1Q9P244 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 AC007191.1-201ENST00000623179 2995 ntBASIC12.89□□□□□ -0.35
LRFN1Q9P244 IL9RP3-201ENST00000442856 1674 ntBASIC12.89□□□□□ -0.35
LRFN1Q9P244 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LRFN1Q9P244 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
LRFN1Q9P244 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 LINC02486-201ENST00000604157 3000 ntBASIC12.88□□□□□ -0.35
LRFN1Q9P244 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.88□□□□□ -0.35
LRFN1Q9P244 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 AC131212.3-201ENST00000624087 4219 ntBASIC12.88□□□□□ -0.35
LRFN1Q9P244 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.88□□□□□ -0.35
LRFN1Q9P244 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.88□□□□□ -0.35
LRFN1Q9P244 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LRFN1Q9P244 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.88□□□□□ -0.35
LRFN1Q9P244 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LRFN1Q9P244 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
LRFN1Q9P244 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.88□□□□□ -0.35
LRFN1Q9P244 AL355334.1-201ENST00000417713 215 ntBASIC12.88□□□□□ -0.35
LRFN1Q9P244 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms