Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AC008620.2-201ENST00000510294 1569 ntBASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 FAM90A12P-201ENST00000519497 2375 ntBASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 FAM90A24P-201ENST00000520792 2369 ntBASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AC004837.1-201ENST00000446267 564 ntBASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AL132994.1-201ENST00000554098 400 ntBASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 AC061965.1-201ENST00000560524 1465 ntBASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
HMG20BQ9P0W2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AP003398.1-201ENST00000531124 318 ntBASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AL009176.1-201ENST00000607876 650 ntBASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.98■□□□□ 0.31
HMG20BQ9P0W2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 AL357563.1-201ENST00000404728 395 ntBASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMG20BQ9P0W2 EEF1DP2-201ENST00000433698 843 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms