Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 SNORA50.1-201ENST00000628590 135 ntBASIC17.29■□□□□ 0.36
UPF2Q9HAU5 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 AC118758.2-201ENST00000614242 2813 ntBASIC17.29■□□□□ 0.36
UPF2Q9HAU5 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC17.29■□□□□ 0.36
UPF2Q9HAU5 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 AC124068.2-201ENST00000569473 1109 ntBASIC17.28■□□□□ 0.36
UPF2Q9HAU5 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 AC073413.1-201ENST00000603927 732 ntBASIC17.28■□□□□ 0.36
UPF2Q9HAU5 ZACNP1-201ENST00000612259 710 ntBASIC17.28■□□□□ 0.36
UPF2Q9HAU5 AL591471.1-201ENST00000621855 229 ntBASIC17.28■□□□□ 0.36
UPF2Q9HAU5 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 STX3-207ENST00000633708 3111 ntTSL 5 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
UPF2Q9HAU5 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 AC102953.2-201ENST00000609755 3026 ntBASIC17.27■□□□□ 0.36
UPF2Q9HAU5 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 CICP1-201ENST00000416803 2410 ntBASIC17.27■□□□□ 0.36
UPF2Q9HAU5 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.27■□□□□ 0.36
UPF2Q9HAU5 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 WASH4P-201ENST00000564273 1246 ntBASIC17.27■□□□□ 0.36
UPF2Q9HAU5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UPF2Q9HAU5 LINC00638-201ENST00000555578 2518 ntBASIC17.27■□□□□ 0.36
UPF2Q9HAU5 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UPF2Q9HAU5 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms