Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 AL391001.1-201ENST00000602747 715 ntBASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 AL133445.2-201ENST00000611191 527 ntBASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 MED25-209ENST00000612791 881 ntTSL 5 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CNTNAP3Q9BZ76 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 LINC00528-201ENST00000600723 2160 ntBASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 RPL18AP16-201ENST00000424057 531 ntBASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AC004771.1-201ENST00000438266 583 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 UGT1A12P-201ENST00000447084 853 ntBASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CHCHD2P6-201ENST00000454346 447 ntBASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 ALDOAP1-201ENST00000491506 1078 ntBASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 FAM213AP2-201ENST00000521579 683 ntBASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 AC139749.1-202ENST00000617529 3139 ntBASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CNTNAP3Q9BZ76 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AGGF1P1-201ENST00000509500 2073 ntBASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CNTNAP3Q9BZ76 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms