Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 LINC00563-201ENST00000566370 1400 ntBASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AHCYP4-201ENST00000419201 1315 ntBASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 CNN2P8-201ENST00000421872 913 ntBASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 POM121L10P-201ENST00000436994 1285 ntBASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 KLF2P1-201ENST00000447438 1042 ntBASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 INGX-202ENST00000489074 768 ntBASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AC009884.2-201ENST00000603110 324 ntBASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GABARAPL3Q9BY60 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 DDX12P-201ENST00000432996 2947 ntBASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 MIR4783-201ENST00000580343 82 ntBASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
GABARAPL3Q9BY60 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
GABARAPL3Q9BY60 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms