Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 AC092573.1-201ENST00000433054 884 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 RN7SL23P-201ENST00000484055 275 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 IGHV1-12-201ENST00000518307 205 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 AC226150.1-201ENST00000544259 466 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 MIR5196-201ENST00000578146 115 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 AC091769.1-201ENST00000619576 568 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 TBC1D27-202ENST00000424239 1573 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 AC025183.3-201ENST00000623526 1482 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AC127024.7-201ENST00000625101 200 ntBASIC16.28■□□□□ 0.2
SLF1Q9BQI6 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 LINC00431-202ENST00000636375 159 ntBASIC16.28■□□□□ 0.2
SLF1Q9BQI6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AC004554.1-201ENST00000422830 1468 ntBASIC16.28■□□□□ 0.2
SLF1Q9BQI6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AC007326.2-201ENST00000624224 7579 ntBASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AC138761.6-201ENST00000583997 1423 ntBASIC16.28■□□□□ 0.2
SLF1Q9BQI6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms