Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.53□□□□□ -0.4
VRK1Q99986 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.53□□□□□ -0.4
VRK1Q99986 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.53□□□□□ -0.4
VRK1Q99986 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.53□□□□□ -0.4
VRK1Q99986 AC138627.1-207ENST00000641560 1006 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.53□□□□□ -0.4
VRK1Q99986 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 PTPRVP-205ENST00000641549 5067 ntBASIC12.53□□□□□ -0.4
VRK1Q99986 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.53□□□□□ -0.4
VRK1Q99986 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VRK1Q99986 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VRK1Q99986 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.52□□□□□ -0.4
VRK1Q99986 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VRK1Q99986 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.52□□□□□ -0.4
VRK1Q99986 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VRK1Q99986 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VRK1Q99986 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
VRK1Q99986 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
VRK1Q99986 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VRK1Q99986 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VRK1Q99986 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.4
VRK1Q99986 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.52□□□□□ -0.41
VRK1Q99986 CES1P1-201ENST00000421606 1704 ntBASIC12.52□□□□□ -0.41
VRK1Q99986 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.52□□□□□ -0.41
VRK1Q99986 AC125604.1-201ENST00000496255 707 ntBASIC12.52□□□□□ -0.41
VRK1Q99986 MARK2P5-201ENST00000507649 634 ntBASIC12.52□□□□□ -0.41
VRK1Q99986 ALG3P1-201ENST00000508806 1114 ntBASIC12.52□□□□□ -0.41
VRK1Q99986 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.52□□□□□ -0.41
VRK1Q99986 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
VRK1Q99986 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
VRK1Q99986 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.52□□□□□ -0.41
VRK1Q99986 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.52□□□□□ -0.41
VRK1Q99986 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
VRK1Q99986 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.52□□□□□ -0.41
VRK1Q99986 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.52□□□□□ -0.41
VRK1Q99986 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VRK1Q99986 AL645939.5-201ENST00000606834 243 ntBASIC12.52□□□□□ -0.41
VRK1Q99986 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 AC090505.1-201ENST00000430515 1834 ntBASIC12.52□□□□□ -0.41
VRK1Q99986 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 MRPL37P1-201ENST00000592451 1337 ntBASIC12.52□□□□□ -0.41
VRK1Q99986 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
VRK1Q99986 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.52□□□□□ -0.41
VRK1Q99986 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.52□□□□□ -0.41
VRK1Q99986 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.52□□□□□ -0.41
VRK1Q99986 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
VRK1Q99986 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VRK1Q99986 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.52□□□□□ -0.41
VRK1Q99986 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms