Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TMEM54Q969K7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 LINC00638-201ENST00000555578 2518 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 AC245884.6-201ENST00000515672 1067 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 MIR4326-201ENST00000582203 59 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 AC097724.1-201ENST00000609581 426 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 AL031673.1-201ENST00000611460 466 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 AC020658.7-201ENST00000624274 2442 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.3□□□□□ -0.44
TMEM54Q969K7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.3□□□□□ -0.44
TMEM54Q969K7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TMEM54Q969K7 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC004623.1-201ENST00000624592 2127 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AL355102.3-201ENST00000554299 1678 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC040160.2-201ENST00000623816 1675 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 RCC2P5-201ENST00000492126 1487 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 MSNP1-201ENST00000511640 1732 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC006372.4-201ENST00000624122 1543 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms