Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 AC008620.2-201ENST00000510294 1569 ntBASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LPCAT1Q8NF37 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 PTENP1-202ENST00000532280 3996 ntBASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 MIR557-201ENST00000385239 98 ntBASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 AC006453.1-201ENST00000636037 1257 ntBASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 AC004554.1-201ENST00000422830 1468 ntBASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 AC015909.5-201ENST00000624336 2266 ntBASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LPCAT1Q8NF37 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 KRT8P18-201ENST00000413425 1445 ntBASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 AC005014.1-201ENST00000432006 2976 ntBASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 KLF17P1-201ENST00000547105 1126 ntBASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.15□□□□□ -0.14
LPCAT1Q8NF37 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms