Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AC025594.1-201ENST00000469533 543 ntBASIC15.11■□□□□ 0.01
HERC6Q8IVU3 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 ALG1L7P-201ENST00000502317 768 ntBASIC15.11■□□□□ 0.01
HERC6Q8IVU3 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AL031673.1-201ENST00000611460 466 ntBASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AC126755.5-201ENST00000622756 267 ntBASIC15.11■□□□□ 0.01
HERC6Q8IVU3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HERC6Q8IVU3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 AC005840.4-201ENST00000541242 2494 ntBASIC15.1■□□□□ 0.01
HERC6Q8IVU3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 GOLGA2P8-201ENST00000505201 779 ntBASIC15.1■□□□□ 0.01
HERC6Q8IVU3 MIR2278-201ENST00000516344 96 ntBASIC15.1■□□□□ 0.01
HERC6Q8IVU3 AC004801.1-201ENST00000549557 360 ntBASIC15.1■□□□□ 0.01
HERC6Q8IVU3 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 PHF23-213ENST00000613632 850 ntTSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.1■□□□□ 0.01
HERC6Q8IVU3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HERC6Q8IVU3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.09■□□□□ 0.01
HERC6Q8IVU3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms