Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 HSPA8P9-201ENST00000485881 1943 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AC006987.1-201ENST00000413610 527 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AC007279.1-201ENST00000448547 837 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AC022210.1-201ENST00000449856 793 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AL591846.1-201ENST00000451736 433 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 COX20P2-201ENST00000452636 358 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 MIR4259-201ENST00000584466 101 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AC007336.3-201ENST00000623886 2160 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 AC126335.2-201ENST00000623362 4637 ntBASIC15.28■□□□□ 0.04
CDKAL1Q5VV42 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 BTBD6P1-201ENST00000412176 1267 ntBASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 AP005482.1-201ENST00000563722 1273 ntBASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 RN7SL560P-201ENST00000577943 264 ntBASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 AC005695.3-201ENST00000614522 232 ntBASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 AL136295.7-201ENST00000619226 1200 ntBASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 COX11-210ENST00000639671 696 ntBASIC15.27■□□□□ 0.04
CDKAL1Q5VV42 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 AL022323.5-201ENST00000624101 2059 ntBASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDKAL1Q5VV42 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKAL1Q5VV42 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKAL1Q5VV42 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC15.26■□□□□ 0.03
CDKAL1Q5VV42 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDKAL1Q5VV42 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CDKAL1Q5VV42 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms