Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AC091181.1-201ENST00000623762 2098 ntBASIC12.49□□□□□ -0.41
EFNB1P98172 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB1P98172 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 RCC2P5-201ENST00000492126 1487 ntBASIC12.49□□□□□ -0.41
EFNB1P98172 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB1P98172 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB1P98172 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB1P98172 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB1P98172 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.49□□□□□ -0.41
EFNB1P98172 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB1P98172 AC007279.1-201ENST00000448547 837 ntBASIC12.49□□□□□ -0.41
EFNB1P98172 CTBP2P5-201ENST00000454986 1264 ntBASIC12.49□□□□□ -0.41
EFNB1P98172 TUBB8P8-201ENST00000458717 1058 ntBASIC12.49□□□□□ -0.41
EFNB1P98172 RPL18P13-201ENST00000478088 569 ntBASIC12.49□□□□□ -0.41
EFNB1P98172 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB1P98172 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB1P98172 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
EFNB1P98172 AC093752.3-201ENST00000567343 901 ntBASIC12.49□□□□□ -0.41
EFNB1P98172 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB1P98172 MIR3940-201ENST00000579148 102 ntBASIC12.49□□□□□ -0.41
EFNB1P98172 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
EFNB1P98172 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB1P98172 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.49□□□□□ -0.41
EFNB1P98172 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
EFNB1P98172 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.49□□□□□ -0.41
EFNB1P98172 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.49□□□□□ -0.41
EFNB1P98172 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
EFNB1P98172 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
EFNB1P98172 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB1P98172 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
EFNB1P98172 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
EFNB1P98172 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB1P98172 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.48□□□□□ -0.41
EFNB1P98172 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
EFNB1P98172 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
EFNB1P98172 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.48□□□□□ -0.41
EFNB1P98172 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 AC079316.1-201ENST00000548397 411 ntBASIC12.48□□□□□ -0.41
EFNB1P98172 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.48□□□□□ -0.41
EFNB1P98172 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.48□□□□□ -0.41
EFNB1P98172 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.48□□□□□ -0.41
EFNB1P98172 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 IGHV3-72-202ENST00000621503 303 ntBASIC12.48□□□□□ -0.41
EFNB1P98172 AC079336.7-201ENST00000623428 1078 ntBASIC12.48□□□□□ -0.41
EFNB1P98172 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 AC027369.3-201ENST00000530465 3707 ntBASIC12.48□□□□□ -0.41
EFNB1P98172 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
EFNB1P98172 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
EFNB1P98172 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms