Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM4P67936 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 AC115284.2-201ENST00000624646 2054 ntBASIC15.8■□□□□ 0.12
TPM4P67936 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 AC020917.4-201ENST00000623994 1999 ntBASIC15.8■□□□□ 0.12
TPM4P67936 GHET1-201ENST00000627071 1906 ntBASIC15.8■□□□□ 0.12
TPM4P67936 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 AC002350.2-201ENST00000623894 1828 ntBASIC15.8■□□□□ 0.12
TPM4P67936 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TPM4P67936 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TPM4P67936 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 AL008718.2-201ENST00000609206 1313 ntBASIC15.8■□□□□ 0.12
TPM4P67936 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 MIR326-201ENST00000362220 95 ntBASIC15.8■□□□□ 0.12
TPM4P67936 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM4P67936 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TPM4P67936 AL591471.1-201ENST00000621855 229 ntBASIC15.8■□□□□ 0.12
TPM4P67936 AC090386.2-201ENST00000623010 1039 ntBASIC15.8■□□□□ 0.12
TPM4P67936 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.8■□□□□ 0.12
TPM4P67936 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TPM4P67936 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TPM4P67936 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TPM4P67936 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM4P67936 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM4P67936 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM4P67936 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TPM4P67936 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM4P67936 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 AC060814.4-201ENST00000594169 2163 ntBASIC15.79■□□□□ 0.12
TPM4P67936 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM4P67936 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM4P67936 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM4P67936 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.79■□□□□ 0.12
TPM4P67936 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 AL590640.2-201ENST00000457038 527 ntBASIC15.79■□□□□ 0.12
TPM4P67936 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.79■□□□□ 0.12
TPM4P67936 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.79■□□□□ 0.12
TPM4P67936 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.79■□□□□ 0.12
TPM4P67936 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 ZACNP1-201ENST00000612259 710 ntBASIC15.79■□□□□ 0.12
TPM4P67936 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TPM4P67936 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM4P67936 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TPM4P67936 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TPM4P67936 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TPM4P67936 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM4P67936 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM4P67936 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM4P67936 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM4P67936 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms