Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.34■□□□□ 0.05
CPT1AP50416 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
CPT1AP50416 OR7E155P-201ENST00000412208 1014 ntBASIC15.34■□□□□ 0.05
CPT1AP50416 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC15.34■□□□□ 0.05
CPT1AP50416 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.34■□□□□ 0.05
CPT1AP50416 VDAC1P11-201ENST00000458323 852 ntBASIC15.34■□□□□ 0.05
CPT1AP50416 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC15.34■□□□□ 0.05
CPT1AP50416 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.34■□□□□ 0.05
CPT1AP50416 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC15.34■□□□□ 0.05
CPT1AP50416 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.34■□□□□ 0.05
CPT1AP50416 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC15.34■□□□□ 0.05
CPT1AP50416 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.34■□□□□ 0.05
CPT1AP50416 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.34■□□□□ 0.05
CPT1AP50416 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.34■□□□□ 0.05
CPT1AP50416 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 AL627230.2-201ENST00000613254 655 ntBASIC15.34■□□□□ 0.05
CPT1AP50416 MEP1AP1-201ENST00000636082 1097 ntBASIC15.34■□□□□ 0.05
CPT1AP50416 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CPT1AP50416 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 AC040160.2-201ENST00000623816 1675 ntBASIC15.34■□□□□ 0.05
CPT1AP50416 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.34■□□□□ 0.05
CPT1AP50416 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CPT1AP50416 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPT1AP50416 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CPT1AP50416 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CPT1AP50416 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CPT1AP50416 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CPT1AP50416 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPT1AP50416 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CPT1AP50416 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CPT1AP50416 AC007686.3-201ENST00000619017 3487 ntBASIC15.33■□□□□ 0.05
CPT1AP50416 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPT1AP50416 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
CPT1AP50416 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CPT1AP50416 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CPT1AP50416 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CPT1AP50416 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CPT1AP50416 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CPT1AP50416 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.33■□□□□ 0.04
CPT1AP50416 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.33■□□□□ 0.04
CPT1AP50416 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.33■□□□□ 0.04
CPT1AP50416 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.33■□□□□ 0.04
CPT1AP50416 AC027139.1-201ENST00000565286 951 ntBASIC15.33■□□□□ 0.04
CPT1AP50416 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC15.33■□□□□ 0.04
CPT1AP50416 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CPT1AP50416 MME-218ENST00000625667 363 ntTSL 5 BASIC15.33■□□□□ 0.04
CPT1AP50416 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.33■□□□□ 0.04
CPT1AP50416 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.33■□□□□ 0.04
CPT1AP50416 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.33■□□□□ 0.04
CPT1AP50416 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.04
CPT1AP50416 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.33■□□□□ 0.04
CPT1AP50416 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.33■□□□□ 0.04
CPT1AP50416 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.33■□□□□ 0.04
CPT1AP50416 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.33■□□□□ 0.04
CPT1AP50416 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPT1AP50416 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 OR2I1P-210ENST00000642037 4691 ntBASIC15.32■□□□□ 0.04
CPT1AP50416 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPT1AP50416 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPT1AP50416 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms