Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CLK1P49759 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CLK1P49759 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.31□□□□□ -0.28
CLK1P49759 AC079178.1-201ENST00000420915 656 ntBASIC13.31□□□□□ -0.28
CLK1P49759 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.31□□□□□ -0.28
CLK1P49759 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.31□□□□□ -0.28
CLK1P49759 KRT223P-202ENST00000449164 1292 ntBASIC13.31□□□□□ -0.28
CLK1P49759 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.31□□□□□ -0.28
CLK1P49759 RNA5SP412-201ENST00000516234 123 ntBASIC13.31□□□□□ -0.28
CLK1P49759 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.31□□□□□ -0.28
CLK1P49759 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 HILS1-202ENST00000545329 423 ntBASIC13.31□□□□□ -0.28
CLK1P49759 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.31□□□□□ -0.28
CLK1P49759 AL358472.3-201ENST00000608147 415 ntBASIC13.31□□□□□ -0.28
CLK1P49759 AC244157.2-201ENST00000616239 1006 ntBASIC13.31□□□□□ -0.28
CLK1P49759 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.31□□□□□ -0.28
CLK1P49759 AC027601.3-201ENST00000622907 509 ntBASIC13.31□□□□□ -0.28
CLK1P49759 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 AC009093.2-202ENST00000620513 2079 ntBASIC13.31□□□□□ -0.28
CLK1P49759 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.31□□□□□ -0.28
CLK1P49759 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.31□□□□□ -0.28
CLK1P49759 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 AC015688.4-201ENST00000580780 1647 ntBASIC13.31□□□□□ -0.28
CLK1P49759 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.31□□□□□ -0.28
CLK1P49759 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CLK1P49759 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CLK1P49759 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.31□□□□□ -0.28
CLK1P49759 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLK1P49759 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC13.31□□□□□ -0.28
CLK1P49759 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CLK1P49759 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 AC009093.10-201ENST00000641956 1442 ntBASIC13.3□□□□□ -0.28
CLK1P49759 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 ANKRD19P-201ENST00000338192 862 ntBASIC13.3□□□□□ -0.28
CLK1P49759 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CLK1P49759 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.3□□□□□ -0.28
CLK1P49759 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.3□□□□□ -0.28
CLK1P49759 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 FAM21FP-201ENST00000426241 1131 ntBASIC13.3□□□□□ -0.28
CLK1P49759 HLA-V-201ENST00000429037 534 ntBASIC13.3□□□□□ -0.28
CLK1P49759 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.3□□□□□ -0.28
CLK1P49759 IGHV3-71-201ENST00000523324 359 ntBASIC13.3□□□□□ -0.28
CLK1P49759 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.3□□□□□ -0.28
CLK1P49759 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.3□□□□□ -0.28
CLK1P49759 MIR4683-201ENST00000579659 81 ntBASIC13.3□□□□□ -0.28
CLK1P49759 AL136301.1-201ENST00000615830 422 ntBASIC13.3□□□□□ -0.28
CLK1P49759 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.3□□□□□ -0.28
CLK1P49759 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLK1P49759 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CLK1P49759 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms