Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
FDFT1P37268 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.33□□□□□ -0.12
FDFT1P37268 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
FDFT1P37268 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.33□□□□□ -0.12
FDFT1P37268 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
FDFT1P37268 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.33□□□□□ -0.12
FDFT1P37268 RPS9P1-201ENST00000419943 583 ntBASIC14.33□□□□□ -0.12
FDFT1P37268 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.33□□□□□ -0.12
FDFT1P37268 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 RCC2P8-201ENST00000502779 1035 ntBASIC14.33□□□□□ -0.12
FDFT1P37268 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.33□□□□□ -0.12
FDFT1P37268 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.33□□□□□ -0.12
FDFT1P37268 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.33□□□□□ -0.12
FDFT1P37268 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.33□□□□□ -0.12
FDFT1P37268 RN7SL455P-201ENST00000580629 282 ntBASIC14.33□□□□□ -0.12
FDFT1P37268 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FDFT1P37268 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.33□□□□□ -0.12
FDFT1P37268 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
FDFT1P37268 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FDFT1P37268 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
FDFT1P37268 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.33□□□□□ -0.12
FDFT1P37268 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
FDFT1P37268 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.33□□□□□ -0.12
FDFT1P37268 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
FDFT1P37268 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FDFT1P37268 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 AC018735.1-201ENST00000437208 1502 ntBASIC14.32□□□□□ -0.12
FDFT1P37268 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
FDFT1P37268 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 OR8S1-201ENST00000310194 1080 ntBASIC14.32□□□□□ -0.12
FDFT1P37268 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
FDFT1P37268 AC006987.1-201ENST00000413610 527 ntBASIC14.32□□□□□ -0.12
FDFT1P37268 BX679664.3-201ENST00000414070 555 ntBASIC14.32□□□□□ -0.12
FDFT1P37268 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.32□□□□□ -0.12
FDFT1P37268 ATP5G2P4-201ENST00000442175 420 ntBASIC14.32□□□□□ -0.12
FDFT1P37268 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FDFT1P37268 AC113935.1-201ENST00000471722 555 ntBASIC14.32□□□□□ -0.12
FDFT1P37268 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.32□□□□□ -0.12
FDFT1P37268 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.32□□□□□ -0.12
FDFT1P37268 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.32□□□□□ -0.12
FDFT1P37268 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.32□□□□□ -0.12
FDFT1P37268 AL161773.1-201ENST00000624845 863 ntBASIC14.32□□□□□ -0.12
FDFT1P37268 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
FDFT1P37268 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
FDFT1P37268 ZNF493-208ENST00000599461 1769 ntBASIC14.32□□□□□ -0.12
FDFT1P37268 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.32□□□□□ -0.12
FDFT1P37268 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FDFT1P37268 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FDFT1P37268 KRT8P21-201ENST00000430398 1491 ntBASIC14.31□□□□□ -0.12
FDFT1P37268 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
FDFT1P37268 BEND3P3-201ENST00000611030 2440 ntBASIC14.31□□□□□ -0.12
FDFT1P37268 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.31□□□□□ -0.12
FDFT1P37268 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
FDFT1P37268 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.31□□□□□ -0.12
FDFT1P37268 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FDFT1P37268 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.31□□□□□ -0.12
FDFT1P37268 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms