Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.02■□□□□ 0.15
CLCN1P35523 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN1P35523 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN1P35523 CICP18-201ENST00000406017 2812 ntBASIC16.02■□□□□ 0.15
CLCN1P35523 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN1P35523 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.02■□□□□ 0.15
CLCN1P35523 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLCN1P35523 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN1P35523 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCN1P35523 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 EGLN3-205ENST00000547327 2849 ntBASIC16.01■□□□□ 0.15
CLCN1P35523 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 ZNF493-208ENST00000599461 1769 ntBASIC16.01■□□□□ 0.15
CLCN1P35523 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.01■□□□□ 0.15
CLCN1P35523 AC007969.1-201ENST00000433675 447 ntBASIC16.01■□□□□ 0.15
CLCN1P35523 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC16.01■□□□□ 0.15
CLCN1P35523 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC16.01■□□□□ 0.15
CLCN1P35523 AC068587.3-201ENST00000526613 355 ntBASIC16.01■□□□□ 0.15
CLCN1P35523 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CLCN1P35523 PTP4A1P2-201ENST00000546033 454 ntBASIC16.01■□□□□ 0.15
CLCN1P35523 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.01■□□□□ 0.15
CLCN1P35523 MIR3908-201ENST00000579798 126 ntBASIC16.01■□□□□ 0.15
CLCN1P35523 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLCN1P35523 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.01■□□□□ 0.15
CLCN1P35523 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCN1P35523 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCN1P35523 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN1P35523 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLCN1P35523 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLCN1P35523 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16■□□□□ 0.15
CLCN1P35523 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLCN1P35523 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLCN1P35523 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 AL138725.1-201ENST00000407347 1314 ntBASIC16■□□□□ 0.15
CLCN1P35523 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 RN7SKP230-201ENST00000365642 335 ntBASIC16■□□□□ 0.15
CLCN1P35523 AC098614.1-201ENST00000368528 745 ntBASIC16■□□□□ 0.15
CLCN1P35523 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16■□□□□ 0.15
CLCN1P35523 POM121L8P-201ENST00000417732 1281 ntBASIC16■□□□□ 0.15
CLCN1P35523 TLE1P1-201ENST00000422965 589 ntBASIC16■□□□□ 0.15
CLCN1P35523 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
CLCN1P35523 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16■□□□□ 0.15
CLCN1P35523 POM121L9P-203ENST00000441984 1285 ntBASIC16■□□□□ 0.15
CLCN1P35523 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16■□□□□ 0.15
CLCN1P35523 AP005018.1-201ENST00000525475 301 ntBASIC16■□□□□ 0.15
CLCN1P35523 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CLCN1P35523 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16■□□□□ 0.15
CLCN1P35523 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16■□□□□ 0.15
CLCN1P35523 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLCN1P35523 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN1P35523 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms