Protein–RNA interactions for Protein: P26006

ITGA3, Integrin alpha-3, humanhuman

Predictions only

Length 1,051 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3P26006 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.17□□□□□ -0.3
ITGA3P26006 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.17□□□□□ -0.3
ITGA3P26006 AL627389.1-201ENST00000413508 1182 ntBASIC13.17□□□□□ -0.3
ITGA3P26006 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.17□□□□□ -0.3
ITGA3P26006 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.17□□□□□ -0.3
ITGA3P26006 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 TMCO5B-205ENST00000530020 894 ntBASIC13.17□□□□□ -0.3
ITGA3P26006 AP000911.2-201ENST00000534330 502 ntBASIC13.17□□□□□ -0.3
ITGA3P26006 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.17□□□□□ -0.3
ITGA3P26006 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.17□□□□□ -0.3
ITGA3P26006 MIR2392-201ENST00000584881 84 ntBASIC13.17□□□□□ -0.3
ITGA3P26006 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.17□□□□□ -0.3
ITGA3P26006 AC005357.2-202ENST00000590507 1060 ntBASIC13.17□□□□□ -0.3
ITGA3P26006 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.17□□□□□ -0.3
ITGA3P26006 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 AL132780.4-201ENST00000624870 1135 ntBASIC13.17□□□□□ -0.3
ITGA3P26006 AC009145.4-201ENST00000625119 1294 ntBASIC13.17□□□□□ -0.3
ITGA3P26006 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ITGA3P26006 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.17□□□□□ -0.3
ITGA3P26006 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
ITGA3P26006 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.17□□□□□ -0.3
ITGA3P26006 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ITGA3P26006 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ITGA3P26006 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.16□□□□□ -0.3
ITGA3P26006 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ITGA3P26006 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ITGA3P26006 LINC01815-202ENST00000641468 1409 ntBASIC13.16□□□□□ -0.3
ITGA3P26006 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.16□□□□□ -0.3
ITGA3P26006 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.16□□□□□ -0.3
ITGA3P26006 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.16□□□□□ -0.3
ITGA3P26006 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 AC097065.1-201ENST00000425737 517 ntBASIC13.16□□□□□ -0.3
ITGA3P26006 RPL13AP19-201ENST00000434320 584 ntBASIC13.16□□□□□ -0.3
ITGA3P26006 AC018638.5-201ENST00000450885 754 ntBASIC13.16□□□□□ -0.3
ITGA3P26006 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.16□□□□□ -0.3
ITGA3P26006 AL157792.1-201ENST00000488281 530 ntBASIC13.16□□□□□ -0.3
ITGA3P26006 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 AC104506.1-201ENST00000609247 429 ntBASIC13.16□□□□□ -0.3
ITGA3P26006 AC105137.3-201ENST00000617588 984 ntBASIC13.16□□□□□ -0.3
ITGA3P26006 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.16□□□□□ -0.3
ITGA3P26006 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.16□□□□□ -0.3
ITGA3P26006 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.16□□□□□ -0.3
ITGA3P26006 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
ITGA3P26006 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ITGA3P26006 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms