Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.2□□□□□ -0.14
VCLP18206 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VCLP18206 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VCLP18206 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
VCLP18206 CYP46A4P-201ENST00000414953 267 ntBASIC14.2□□□□□ -0.14
VCLP18206 TSPY25P-201ENST00000429463 745 ntBASIC14.2□□□□□ -0.14
VCLP18206 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 AL133466.1-201ENST00000447582 150 ntBASIC14.2□□□□□ -0.14
VCLP18206 POU5F1P2-201ENST00000521750 823 ntBASIC14.2□□□□□ -0.14
VCLP18206 RN7SL774P-201ENST00000577467 290 ntBASIC14.2□□□□□ -0.14
VCLP18206 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.2□□□□□ -0.14
VCLP18206 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.2□□□□□ -0.14
VCLP18206 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.2□□□□□ -0.14
VCLP18206 AC090386.2-201ENST00000623010 1039 ntBASIC14.2□□□□□ -0.14
VCLP18206 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.2□□□□□ -0.14
VCLP18206 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VCLP18206 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.2□□□□□ -0.14
VCLP18206 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.2□□□□□ -0.14
VCLP18206 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
VCLP18206 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VCLP18206 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VCLP18206 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VCLP18206 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VCLP18206 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 AL022313.4-201ENST00000562756 2046 ntBASIC14.19□□□□□ -0.14
VCLP18206 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.19□□□□□ -0.14
VCLP18206 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 AC239868.1-201ENST00000369385 493 ntBASIC14.19□□□□□ -0.14
VCLP18206 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 AL662890.1-201ENST00000396818 632 ntBASIC14.19□□□□□ -0.14
VCLP18206 SLC25A24P2-201ENST00000415059 510 ntBASIC14.19□□□□□ -0.14
VCLP18206 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.19□□□□□ -0.14
VCLP18206 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.19□□□□□ -0.14
VCLP18206 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 OR2R1P-201ENST00000441404 914 ntBASIC14.19□□□□□ -0.14
VCLP18206 SPTLC1P5-201ENST00000450718 252 ntBASIC14.19□□□□□ -0.14
VCLP18206 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.19□□□□□ -0.14
VCLP18206 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.19□□□□□ -0.14
VCLP18206 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
VCLP18206 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.19□□□□□ -0.14
VCLP18206 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.19□□□□□ -0.14
VCLP18206 CU633904.3-201ENST00000624042 1029 ntBASIC14.19□□□□□ -0.14
VCLP18206 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.19□□□□□ -0.14
VCLP18206 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.19□□□□□ -0.14
VCLP18206 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.19□□□□□ -0.14
VCLP18206 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VCLP18206 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VCLP18206 AL365181.3-201ENST00000605886 3222 ntBASIC14.19□□□□□ -0.14
VCLP18206 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms