Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC22.92■■□□□ 1.26
CFTRP13569 AC069061.4-201ENST00000581294 1347 ntBASIC22.92■■□□□ 1.26
CFTRP13569 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
CFTRP13569 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 AC239600.1-201ENST00000603201 462 ntBASIC22.92■■□□□ 1.26
CFTRP13569 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC22.92■■□□□ 1.26
CFTRP13569 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CFTRP13569 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 GSTM1-204ENST00000369823 852 ntTSL 3 BASIC22.92■■□□□ 1.26
CFTRP13569 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC22.92■■□□□ 1.26
CFTRP13569 ABCC6P2-201ENST00000526069 590 ntBASIC22.92■■□□□ 1.26
CFTRP13569 PEBP1P1-201ENST00000554856 510 ntBASIC22.92■■□□□ 1.26
CFTRP13569 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC22.92■■□□□ 1.26
CFTRP13569 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC22.92■■□□□ 1.26
CFTRP13569 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC22.92■■□□□ 1.26
CFTRP13569 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC22.92■■□□□ 1.26
CFTRP13569 MIR378I-201ENST00000582688 76 ntBASIC22.92■■□□□ 1.26
CFTRP13569 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC22.92■■□□□ 1.26
CFTRP13569 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
CFTRP13569 U62317.4-201ENST00000609758 448 ntBASIC22.92■■□□□ 1.26
CFTRP13569 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC22.91■■□□□ 1.26
CFTRP13569 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CFTRP13569 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC22.91■■□□□ 1.26
CFTRP13569 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CFTRP13569 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC22.91■■□□□ 1.26
CFTRP13569 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CFTRP13569 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CFTRP13569 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC22.91■■□□□ 1.26
CFTRP13569 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CFTRP13569 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CFTRP13569 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CFTRP13569 AC073488.1-201ENST00000416620 1600 ntBASIC22.9■■□□□ 1.26
CFTRP13569 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CFTRP13569 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC22.9■■□□□ 1.26
CFTRP13569 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
CFTRP13569 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFTRP13569 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CFTRP13569 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CFTRP13569 AC135506.1-201ENST00000603877 1799 ntBASIC22.9■■□□□ 1.26
CFTRP13569 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CFTRP13569 MIR324-201ENST00000362183 83 ntBASIC22.9■■□□□ 1.26
CFTRP13569 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CFTRP13569 ATP5G1P7-201ENST00000444398 400 ntBASIC22.9■■□□□ 1.26
CFTRP13569 RN7SL340P-201ENST00000470792 296 ntBASIC22.9■■□□□ 1.26
CFTRP13569 IGHV7-56-201ENST00000518372 351 ntBASIC22.9■■□□□ 1.26
CFTRP13569 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC22.9■■□□□ 1.26
CFTRP13569 AL606834.1-201ENST00000553836 1169 ntBASIC22.9■■□□□ 1.26
CFTRP13569 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC22.9■■□□□ 1.26
CFTRP13569 AC103706.1-201ENST00000561761 679 ntBASIC22.9■■□□□ 1.26
CFTRP13569 MIR4459-201ENST00000581837 66 ntBASIC22.9■■□□□ 1.26
CFTRP13569 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC22.9■■□□□ 1.26
CFTRP13569 MIR6871-201ENST00000613433 56 ntBASIC22.9■■□□□ 1.26
CFTRP13569 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC22.9■■□□□ 1.26
CFTRP13569 FRG2EP-201ENST00000634243 835 ntBASIC22.9■■□□□ 1.26
CFTRP13569 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CFTRP13569 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC22.9■■□□□ 1.26
CFTRP13569 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFTRP13569 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC22.9■■□□□ 1.26
CFTRP13569 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFTRP13569 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CFTRP13569 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CFTRP13569 DBET-201ENST00000630918 3363 ntBASIC22.89■■□□□ 1.26
CFTRP13569 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC22.89■■□□□ 1.26
CFTRP13569 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
CFTRP13569 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.26
CFTRP13569 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CFTRP13569 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CFTRP13569 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.26
CFTRP13569 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
CFTRP13569 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
CFTRP13569 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CFTRP13569 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
CFTRP13569 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
CFTRP13569 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms