Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 BAP1-211ENST00000615113 489 ntBASIC15.4■□□□□ 0.06
CLTAP09496 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.4■□□□□ 0.06
CLTAP09496 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.4■□□□□ 0.06
CLTAP09496 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.4■□□□□ 0.06
CLTAP09496 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.4■□□□□ 0.06
CLTAP09496 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.4■□□□□ 0.06
CLTAP09496 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLTAP09496 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CLTAP09496 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 AC105206.1-202ENST00000314927 2368 ntBASIC15.39■□□□□ 0.05
CLTAP09496 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CLTAP09496 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.39■□□□□ 0.05
CLTAP09496 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.39■□□□□ 0.05
CLTAP09496 AC026316.1-201ENST00000398900 414 ntBASIC15.39■□□□□ 0.05
CLTAP09496 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.39■□□□□ 0.05
CLTAP09496 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.39■□□□□ 0.05
CLTAP09496 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.39■□□□□ 0.05
CLTAP09496 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 AC103691.2-201ENST00000618824 433 ntBASIC15.39■□□□□ 0.05
CLTAP09496 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 AL591122.2-201ENST00000624125 1853 ntBASIC15.39■□□□□ 0.05
CLTAP09496 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CLTAP09496 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CLTAP09496 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLTAP09496 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CLTAP09496 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLTAP09496 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLTAP09496 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLTAP09496 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
CLTAP09496 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLTAP09496 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CLTAP09496 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLTAP09496 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLTAP09496 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 NDUFS6P1-201ENST00000485187 316 ntBASIC15.38■□□□□ 0.05
CLTAP09496 RPL18AP8-201ENST00000486071 528 ntBASIC15.38■□□□□ 0.05
CLTAP09496 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.38■□□□□ 0.05
CLTAP09496 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.38■□□□□ 0.05
CLTAP09496 RN7SL455P-201ENST00000580629 282 ntBASIC15.38■□□□□ 0.05
CLTAP09496 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.38■□□□□ 0.05
CLTAP09496 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.38■□□□□ 0.05
CLTAP09496 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.38■□□□□ 0.05
CLTAP09496 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLTAP09496 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLTAP09496 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CLTAP09496 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms