Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TPM2P07951 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM2P07951 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
TPM2P07951 AC064801.2-201ENST00000625052 1303 ntBASIC16.06■□□□□ 0.16
TPM2P07951 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TPM2P07951 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM2P07951 ACTG1P3-201ENST00000431775 1114 ntBASIC16.06■□□□□ 0.16
TPM2P07951 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM2P07951 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM2P07951 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM2P07951 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM2P07951 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM2P07951 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM2P07951 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TPM2P07951 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TPM2P07951 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC16.06■□□□□ 0.16
TPM2P07951 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM2P07951 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TPM2P07951 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TPM2P07951 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TPM2P07951 AC009093.10-201ENST00000641956 1442 ntBASIC16.05■□□□□ 0.16
TPM2P07951 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM2P07951 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TPM2P07951 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TPM2P07951 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 RN7SKP175-201ENST00000408472 289 ntBASIC16.05■□□□□ 0.16
TPM2P07951 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.05■□□□□ 0.16
TPM2P07951 AL355864.2-201ENST00000447420 863 ntBASIC16.05■□□□□ 0.16
TPM2P07951 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM2P07951 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.05■□□□□ 0.16
TPM2P07951 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TPM2P07951 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TPM2P07951 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.05■□□□□ 0.16
TPM2P07951 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.05■□□□□ 0.16
TPM2P07951 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.05■□□□□ 0.16
TPM2P07951 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.05■□□□□ 0.16
TPM2P07951 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 AL645937.6-201ENST00000641122 3727 ntBASIC16.05■□□□□ 0.16
TPM2P07951 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 AL132642.2-201ENST00000623423 1998 ntBASIC16.05■□□□□ 0.16
TPM2P07951 FLJ30679-201ENST00000624773 1980 ntBASIC16.05■□□□□ 0.16
TPM2P07951 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC16.05■□□□□ 0.16
TPM2P07951 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM2P07951 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TPM2P07951 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TPM2P07951 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TPM2P07951 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms