Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 SMIM19-205ENST00000490331 487 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MYCNP04198 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC16.96■□□□□ 0.31
MYCNP04198 IQSEC3P1-201ENST00000538799 536 ntBASIC16.96■□□□□ 0.31
MYCNP04198 AC073863.1-201ENST00000550206 570 ntTSL 4 BASIC16.96■□□□□ 0.31
MYCNP04198 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC16.96■□□□□ 0.31
MYCNP04198 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.96■□□□□ 0.31
MYCNP04198 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.96■□□□□ 0.31
MYCNP04198 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
MYCNP04198 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.96■□□□□ 0.31
MYCNP04198 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC16.96■□□□□ 0.31
MYCNP04198 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.96■□□□□ 0.31
MYCNP04198 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.96■□□□□ 0.31
MYCNP04198 AP000943.4-201ENST00000622912 357 ntBASIC16.96■□□□□ 0.31
MYCNP04198 AC104985.3-201ENST00000623479 597 ntBASIC16.96■□□□□ 0.31
MYCNP04198 PIGA-209ENST00000634582 965 ntTSL 2 BASIC16.96■□□□□ 0.31
MYCNP04198 LINC01739-204ENST00000641712 1005 ntBASIC16.96■□□□□ 0.31
MYCNP04198 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.96■□□□□ 0.31
MYCNP04198 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.96■□□□□ 0.31
MYCNP04198 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MYCNP04198 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.96■□□□□ 0.31
MYCNP04198 LINC01343-201ENST00000431311 2283 ntTSL 3 BASIC16.96■□□□□ 0.31
MYCNP04198 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MYCNP04198 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MYCNP04198 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MYCNP04198 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MYCNP04198 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MYCNP04198 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
MYCNP04198 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MYCNP04198 LINC02447-202ENST00000501888 2146 ntBASIC16.96■□□□□ 0.3
MYCNP04198 AC104640.1-201ENST00000562617 2109 ntBASIC16.96■□□□□ 0.3
MYCNP04198 AL359183.1-201ENST00000623796 2132 ntBASIC16.96■□□□□ 0.3
MYCNP04198 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MYCNP04198 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MYCNP04198 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MYCNP04198 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
MYCNP04198 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.96■□□□□ 0.3
MYCNP04198 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
MYCNP04198 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.96■□□□□ 0.3
MYCNP04198 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 RAB37-212ENST00000528438 1494 ntTSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
MYCNP04198 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 USP9YP11-201ENST00000427537 717 ntBASIC16.95■□□□□ 0.3
MYCNP04198 GTF3AP6-201ENST00000432585 986 ntBASIC16.95■□□□□ 0.3
MYCNP04198 AC103591.1-201ENST00000448345 556 ntBASIC16.95■□□□□ 0.3
MYCNP04198 FGFR3P1-201ENST00000449999 601 ntBASIC16.95■□□□□ 0.3
MYCNP04198 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 RPSAP34-201ENST00000476193 736 ntBASIC16.95■□□□□ 0.3
MYCNP04198 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.95■□□□□ 0.3
MYCNP04198 MTHFD2P6-201ENST00000506170 1022 ntBASIC16.95■□□□□ 0.3
MYCNP04198 LINC01099-201ENST00000507011 512 ntTSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
MYCNP04198 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC16.95■□□□□ 0.3
MYCNP04198 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 AC090857.1-201ENST00000527400 390 ntBASIC16.95■□□□□ 0.3
MYCNP04198 INTS4-205ENST00000527522 956 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.95■□□□□ 0.3
MYCNP04198 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.95■□□□□ 0.3
MYCNP04198 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 AC007610.3-201ENST00000566879 934 ntBASIC16.95■□□□□ 0.3
MYCNP04198 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 BNIP3P13-201ENST00000599968 566 ntBASIC16.95■□□□□ 0.3
MYCNP04198 AC023762.1-201ENST00000603280 584 ntBASIC16.95■□□□□ 0.3
MYCNP04198 AC017083.3-201ENST00000609955 700 ntBASIC16.95■□□□□ 0.3
MYCNP04198 AC097478.3-201ENST00000620420 872 ntBASIC16.95■□□□□ 0.3
MYCNP04198 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 AL356473.1-201ENST00000406203 1408 ntBASIC16.95■□□□□ 0.3
MYCNP04198 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MYCNP04198 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MYCNP04198 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC16.95■□□□□ 0.3
MYCNP04198 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MYCNP04198 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.94■□□□□ 0.3
MYCNP04198 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
MYCNP04198 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.94■□□□□ 0.3
MYCNP04198 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
MYCNP04198 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms