RNA–Protein interactions for RNA: ENST00000641712.1

LINC01739-204, Transcript of long intergenic non-protein coding RNA 1739, humanhuman

BASIC

Gene LINC01739, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01739-204ENST00000641712 AEBP2Q6ZN18 517 aaPredicted RBP29.36■■■□□ 2.29
LINC01739-204ENST00000641712 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
LINC01739-204ENST00000641712 SENP3Q9H4L4 574 aaPredicted RBP25.04■■□□□ 1.6
LINC01739-204ENST00000641712 PHF23Q9BUL5 403 aaPredicted RBP24.7■■□□□ 1.54
LINC01739-204ENST00000641712 FOXD1Q16676 465 aa23.36■■□□□ 1.33
LINC01739-204ENST00000641712 PLPPR3Q6T4P5 718 aa22.14■■□□□ 1.13
LINC01739-204ENST00000641712 MSH5O43196 834 aa21.89■■□□□ 1.09
LINC01739-204ENST00000641712 PIAS4Q8N2W9 510 aaPredicted RBP21.77■■□□□ 1.08
LINC01739-204ENST00000641712 PPP6R1Q9UPN7 881 aa21.77■■□□□ 1.08
LINC01739-204ENST00000641712 ADRA2BP18089 450 aa21.67■■□□□ 1.06
LINC01739-204ENST00000641712 POTEDQ86YR6 584 aa21.54■■□□□ 1.04
LINC01739-204ENST00000641712 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
LINC01739-204ENST00000641712 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
LINC01739-204ENST00000641712 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
LINC01739-204ENST00000641712 PPP4R3CPQ6ZMV5 832 aa19.39■□□□□ 0.69
LINC01739-204ENST00000641712 HOXD11P31277 338 aaPredicted RBP19.11■□□□□ 0.65
LINC01739-204ENST00000641712 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
LINC01739-204ENST00000641712 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
LINC01739-204ENST00000641712 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
LINC01739-204ENST00000641712 CACNB1Q02641 598 aaPredicted RBP18.81■□□□□ 0.6
LINC01739-204ENST00000641712 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
LINC01739-204ENST00000641712 RNF39Q9H2S5 420 aa18.69■□□□□ 0.58
LINC01739-204ENST00000641712 NCBP3Q53F19 620 aaKnown RBP18.59■□□□□ 0.57
LINC01739-204ENST00000641712 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
LINC01739-204ENST00000641712 C1QBPQ07021 282 aaKnown RBP18.41■□□□□ 0.54
LINC01739-204ENST00000641712 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
LINC01739-204ENST00000641712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
LINC01739-204ENST00000641712 KCNA4P22459 653 aa17.9■□□□□ 0.46
LINC01739-204ENST00000641712 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
LINC01739-204ENST00000641712 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
LINC01739-204ENST00000641712 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
LINC01739-204ENST00000641712 CAPN15O75808 1086 aa17.49■□□□□ 0.39
LINC01739-204ENST00000641712 DSG3P32926 999 aa17.46■□□□□ 0.39
LINC01739-204ENST00000641712 APLP2Q06481 763 aa17.25■□□□□ 0.35
LINC01739-204ENST00000641712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
LINC01739-204ENST00000641712 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
LINC01739-204ENST00000641712 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
LINC01739-204ENST00000641712 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
LINC01739-204ENST00000641712 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
LINC01739-204ENST00000641712 ABCB7O75027 752 aa17.08■□□□□ 0.32
LINC01739-204ENST00000641712 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
LINC01739-204ENST00000641712 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
LINC01739-204ENST00000641712 POTEHQ6S545 545 aa16.85■□□□□ 0.29
LINC01739-204ENST00000641712 FOXD4L1Q9NU39 408 aa16.74■□□□□ 0.27
LINC01739-204ENST00000641712 POLA2Q14181 598 aa16.73■□□□□ 0.27
LINC01739-204ENST00000641712 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
LINC01739-204ENST00000641712 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
LINC01739-204ENST00000641712 ZBTB22O15209 634 aa16.48■□□□□ 0.23
LINC01739-204ENST00000641712 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
LINC01739-204ENST00000641712 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
LINC01739-204ENST00000641712 ATXN8OSP0DMR3 200 aa16.25■□□□□ 0.19
LINC01739-204ENST00000641712 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
LINC01739-204ENST00000641712 OSCARQ8IYS5 282 aa16.19■□□□□ 0.18
LINC01739-204ENST00000641712 REM2Q8IYK8 340 aaPredicted RBP16.09■□□□□ 0.17
LINC01739-204ENST00000641712 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
LINC01739-204ENST00000641712 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
LINC01739-204ENST00000641712 PITPNM1O00562 1244 aa15.92■□□□□ 0.14
LINC01739-204ENST00000641712 PIP4P2Q8N4L2 257 aa15.92■□□□□ 0.14
LINC01739-204ENST00000641712 FBLN2P98095 1184 aa15.91■□□□□ 0.14
LINC01739-204ENST00000641712 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
LINC01739-204ENST00000641712 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
LINC01739-204ENST00000641712 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
LINC01739-204ENST00000641712 MKRN4PQ13434 485 aaPredicted RBP15.84■□□□□ 0.13
LINC01739-204ENST00000641712 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.12
LINC01739-204ENST00000641712 SP7Q8TDD2 431 aaPredicted RBP15.76■□□□□ 0.11
LINC01739-204ENST00000641712 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.1
LINC01739-204ENST00000641712 SSUH2Q9Y2M2 353 aa15.68■□□□□ 0.1
LINC01739-204ENST00000641712 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
LINC01739-204ENST00000641712 CSRNP3Q8WYN3 585 aa15.63■□□□□ 0.09
LINC01739-204ENST00000641712 HAX1O00165 279 aa15.62■□□□□ 0.09
LINC01739-204ENST00000641712 SPDYE1Q8NFV5 336 aaPredicted RBP15.61■□□□□ 0.09
LINC01739-204ENST00000641712 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
LINC01739-204ENST00000641712 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
LINC01739-204ENST00000641712 PRKAR2AP13861 404 aaKnown RBP15.5■□□□□ 0.07
LINC01739-204ENST00000641712 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
LINC01739-204ENST00000641712 EVX2Q03828 476 aa15.47■□□□□ 0.07
LINC01739-204ENST00000641712 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC01739-204ENST00000641712 C19orf67A6NJJ6 358 aa15.32■□□□□ 0.04
LINC01739-204ENST00000641712 PRR29P0C7W0 189 aa15.31■□□□□ 0.04
LINC01739-204ENST00000641712 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
LINC01739-204ENST00000641712 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
LINC01739-204ENST00000641712 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
LINC01739-204ENST00000641712 MYO15BQ96JP2 1530 aa15.18■□□□□ 0.02
LINC01739-204ENST00000641712 GABBR2O75899 941 aa15.11■□□□□ 0.01
LINC01739-204ENST00000641712 FARP1Q9Y4F1 1045 aaPredicted RBP15.08■□□□□ 0
LINC01739-204ENST00000641712 ABCC9O60706 1549 aa15.02□□□□□ -0.01
LINC01739-204ENST00000641712 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
LINC01739-204ENST00000641712 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
LINC01739-204ENST00000641712 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
LINC01739-204ENST00000641712 CREBZFQ9NS37 354 aa14.94□□□□□ -0.02
LINC01739-204ENST00000641712 HRCP23327 699 aa14.89□□□□□ -0.03
LINC01739-204ENST00000641712 CLCN6P51797 869 aa14.85□□□□□ -0.03
LINC01739-204ENST00000641712 NACADO15069 1562 aa14.85□□□□□ -0.03
LINC01739-204ENST00000641712 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.04
LINC01739-204ENST00000641712 POTEIP0CG38 1075 aa14.81□□□□□ -0.04
LINC01739-204ENST00000641712 SCRIBQ14160 1630 aa14.8□□□□□ -0.04
LINC01739-204ENST00000641712 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
LINC01739-204ENST00000641712 LHX8Q68G74 356 aa14.77□□□□□ -0.05
LINC01739-204ENST00000641712 ZRANB1Q9UGI0 708 aa14.77□□□□□ -0.05
LINC01739-204ENST00000641712 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms