Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC11.1□□□□□ -0.63
TRGV3P03979 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
TRGV3P03979 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11.1□□□□□ -0.63
TRGV3P03979 NME6-203ENST00000415644 849 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 CMC1-204ENST00000423894 549 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC11.1□□□□□ -0.63
TRGV3P03979 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 AC012618.1-201ENST00000461223 412 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 GOLGA2P8-201ENST00000505201 779 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 ALG1L13P-202ENST00000519320 584 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 NOP2-211ENST00000540228 668 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 KRT8P1-201ENST00000557533 1207 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC11.1□□□□□ -0.63
TRGV3P03979 LINC01783-202ENST00000614408 828 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 AP001505.2-201ENST00000616815 443 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 BX284668.2-205ENST00000619677 828 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 AC008132.1-202ENST00000342005 1389 ntBASIC11.1□□□□□ -0.63
TRGV3P03979 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.1□□□□□ -0.63
TRGV3P03979 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.1□□□□□ -0.63
TRGV3P03979 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
TRGV3P03979 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRGV3P03979 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
TRGV3P03979 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TRGV3P03979 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TRGV3P03979 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TRGV3P03979 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 AL139158.3-201ENST00000641212 1562 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 ELK2AP-201ENST00000392510 1007 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 LBH-202ENST00000401506 485 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV3P03979 AC006987.1-201ENST00000413610 527 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV3P03979 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.09□□□□□ -0.63
TRGV3P03979 MSRA-203ENST00000441698 788 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 AL353637.1-201ENST00000451571 732 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 CHCHD2P2-201ENST00000503744 321 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 AC008723.1-201ENST00000506922 207 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 NEU3-202ENST00000526068 431 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
TRGV3P03979 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV3P03979 AL161670.2-201ENST00000557650 1227 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms