Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL450346.2-201ENST00000495602 1024 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 AC114812.4-201ENST00000506676 757 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 AC084262.1-201ENST00000567818 751 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 RN7SL4P-201ENST00000584058 295 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMP1P01033 MIR6893-201ENST00000613458 69 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC14.81□□□□□ -0.04
TIMP1P01033 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 AC024075.2-201ENST00000598112 1473 ntBASIC14.81□□□□□ -0.04
TIMP1P01033 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TIMP1P01033 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TIMP1P01033 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TIMP1P01033 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.81□□□□□ -0.04
TIMP1P01033 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.8□□□□□ -0.04
TIMP1P01033 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 SERF2-204ENST00000402131 586 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMP1P01033 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.8□□□□□ -0.04
TIMP1P01033 IQCF4-203ENST00000428561 420 ntBASIC14.8□□□□□ -0.04
TIMP1P01033 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMP1P01033 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 DUX4L31-201ENST00000446466 1136 ntBASIC14.8□□□□□ -0.04
TIMP1P01033 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC14.8□□□□□ -0.04
TIMP1P01033 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMP1P01033 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC14.8□□□□□ -0.04
TIMP1P01033 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.8□□□□□ -0.04
TIMP1P01033 AC022001.3-201ENST00000606330 596 ntBASIC14.8□□□□□ -0.04
TIMP1P01033 AL109954.3-201ENST00000615088 558 ntBASIC14.8□□□□□ -0.04
TIMP1P01033 AC134878.2-201ENST00000620700 1265 ntBASIC14.8□□□□□ -0.04
TIMP1P01033 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC14.8□□□□□ -0.04
TIMP1P01033 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC14.8□□□□□ -0.04
TIMP1P01033 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.8□□□□□ -0.04
TIMP1P01033 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 RCC2P5-201ENST00000492126 1487 ntBASIC14.8□□□□□ -0.04
TIMP1P01033 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TIMP1P01033 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TIMP1P01033 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TIMP1P01033 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.8□□□□□ -0.04
TIMP1P01033 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TIMP1P01033 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TIMP1P01033 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TIMP1P01033 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC14.79□□□□□ -0.04
TIMP1P01033 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC14.79□□□□□ -0.04
TIMP1P01033 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TIMP1P01033 AC010997.1-201ENST00000447646 350 ntBASIC14.79□□□□□ -0.04
TIMP1P01033 RPL35P1-201ENST00000450819 370 ntBASIC14.79□□□□□ -0.04
TIMP1P01033 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms