Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 AC125807.2-201ENST00000513358 3514 ntBASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.09□□□□□ -0.63
RPH3ALQ9UNE2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.08□□□□□ -0.63
RPH3ALQ9UNE2 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.08□□□□□ -0.63
RPH3ALQ9UNE2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 RN7SKP230-201ENST00000365642 335 ntBASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 USP17L6P-201ENST00000382470 1197 ntBASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 AL359711.2-201ENST00000563105 872 ntBASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 AC004790.1-201ENST00000612686 536 ntBASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RPH3ALQ9UNE2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RPH3ALQ9UNE2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms