Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 AC012617.1-204ENST00000586340 2305 ntBASIC14.06□□□□□ -0.16
SPASTQ9UBP0 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPASTQ9UBP0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 RN7SL832P-201ENST00000607781 1756 ntBASIC14.05□□□□□ -0.16
SPASTQ9UBP0 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 AP001184.1-201ENST00000637936 376 ntBASIC14.05□□□□□ -0.16
SPASTQ9UBP0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 MEX3B-202ENST00000558133 4333 ntBASIC14.05□□□□□ -0.16
SPASTQ9UBP0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPASTQ9UBP0 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 AC215219.1-201ENST00000400706 1817 ntBASIC14.04□□□□□ -0.16
SPASTQ9UBP0 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.04□□□□□ -0.16
SPASTQ9UBP0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms