Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AC006116.2-201ENST00000589958 988 ntBASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 AC007686.3-201ENST00000619017 3487 ntBASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TRMT13Q9NUP7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AC020931.1-201ENST00000589622 1346 ntBASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 HLA-DMA-202ENST00000395303 1007 ntBASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AC041040.1-201ENST00000425197 460 ntBASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AL136084.1-201ENST00000449172 318 ntBASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AC079250.1-201ENST00000456046 531 ntBASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AC079414.2-201ENST00000567157 1104 ntBASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 FBXO36P1-201ENST00000579006 471 ntBASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRMT13Q9NUP7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 AL157823.1-201ENST00000403727 628 ntBASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 KRT8P30-201ENST00000432100 650 ntBASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 BCL2L12P1-201ENST00000508390 733 ntBASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 FAM187B2P-201ENST00000577135 713 ntBASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 MIR4254-201ENST00000581063 76 ntBASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 AL591424.3-201ENST00000614278 872 ntBASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms