Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 LRRC59-203ENST00000576448 1531 ntBASIC14.31□□□□□ -0.12
TRIM55Q9BYV6 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 CALR4P-201ENST00000431943 946 ntBASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 AK2P2-201ENST00000439142 405 ntBASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 HOMER2P2-201ENST00000451621 847 ntBASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 IGHJ2P-201ENST00000454480 60 ntBASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 RNA5SP486-201ENST00000515961 83 ntBASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 RHOQP1-201ENST00000555758 579 ntBASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 AL021578.1-201ENST00000613646 709 ntBASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRIM55Q9BYV6 LINC00567-201ENST00000569854 3409 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AL445250.1-201ENST00000641671 2259 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 RN7SKP230-201ENST00000365642 335 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 KLF2P2-201ENST00000416807 1039 ntBASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM55Q9BYV6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms