Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 AC040160.2-201ENST00000623816 1675 ntBASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 AF013593.1-201ENST00000458074 1487 ntBASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 AC063926.3-201ENST00000624734 5658 ntBASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 AC008040.5-201ENST00000599781 1781 ntBASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 TUBBP5-203ENST00000508529 1334 ntBASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.8□□□□□ -0.36
RSPO3Q9BXY4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 TBC1D27-202ENST00000424239 1573 ntBASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 AC005722.1-201ENST00000431878 964 ntBASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 AC004898.1-201ENST00000451057 766 ntBASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 AL118558.3-201ENST00000607414 1079 ntBASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RSPO3Q9BXY4 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms