Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AL359711.2-201ENST00000563105 872 ntBASIC13.08□□□□□ -0.32
HPS1Q92902 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 AC115989.2-201ENST00000578640 563 ntBASIC13.08□□□□□ -0.32
HPS1Q92902 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.08□□□□□ -0.32
HPS1Q92902 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.08□□□□□ -0.32
HPS1Q92902 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC13.08□□□□□ -0.32
HPS1Q92902 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 AC084782.3-201ENST00000612282 578 ntBASIC13.08□□□□□ -0.32
HPS1Q92902 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
HPS1Q92902 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.08□□□□□ -0.32
HPS1Q92902 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.08□□□□□ -0.32
HPS1Q92902 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
HPS1Q92902 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HPS1Q92902 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 AC112176.1-201ENST00000565428 3024 ntBASIC13.07□□□□□ -0.32
HPS1Q92902 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.07□□□□□ -0.32
HPS1Q92902 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HPS1Q92902 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
HPS1Q92902 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC13.07□□□□□ -0.32
HPS1Q92902 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.07□□□□□ -0.32
HPS1Q92902 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.07□□□□□ -0.32
HPS1Q92902 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 VDAC1P7-201ENST00000462417 847 ntBASIC13.07□□□□□ -0.32
HPS1Q92902 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 AC119751.2-201ENST00000504529 210 ntBASIC13.07□□□□□ -0.32
HPS1Q92902 AC025423.2-201ENST00000537570 439 ntBASIC13.07□□□□□ -0.32
HPS1Q92902 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.07□□□□□ -0.32
HPS1Q92902 AL158211.1-201ENST00000566763 763 ntBASIC13.07□□□□□ -0.32
HPS1Q92902 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.07□□□□□ -0.32
HPS1Q92902 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.07□□□□□ -0.32
HPS1Q92902 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.07□□□□□ -0.32
HPS1Q92902 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.07□□□□□ -0.32
HPS1Q92902 AC020910.6-201ENST00000623084 1459 ntBASIC13.07□□□□□ -0.32
HPS1Q92902 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HPS1Q92902 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
HPS1Q92902 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 AL354702.1-201ENST00000442006 1960 ntBASIC13.07□□□□□ -0.32
HPS1Q92902 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HPS1Q92902 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.06□□□□□ -0.32
HPS1Q92902 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.06□□□□□ -0.32
HPS1Q92902 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.06□□□□□ -0.32
HPS1Q92902 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
HPS1Q92902 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.06□□□□□ -0.32
HPS1Q92902 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HPS1Q92902 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
HPS1Q92902 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.06□□□□□ -0.32
HPS1Q92902 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HPS1Q92902 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
HPS1Q92902 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms