Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AL590440.2-201ENST00000641973 1595 ntBASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 RPSAP36-202ENST00000494591 1261 ntBASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CFAP61Q8NHU2 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 AGAP10P-201ENST00000454844 2418 ntBASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 AC132192.2-201ENST00000596206 1147 ntBASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 PTPRVP-205ENST00000641549 5067 ntBASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFAP61Q8NHU2 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CFAP61Q8NHU2 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CFAP61Q8NHU2 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CFAP61Q8NHU2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms